| ShortSummary | - The House of Discontent: The spirit of the harvest moon appears one night, demanding the Bagges leave since Eustace can't seem to grow anything on their land.
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The Sand Whale Strikes: A sand whale mistakes Eustace for his dead father, Eickett, and demands on giving back his accordion he swindled from him.
- Queen of the Black Puddle: A strange lady rises from a puddle after a rainy-day, persuading Eustace to follow her.
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Everyone Wants to Direct: Benton Tarantella wants to make a movie in the Bagge's house basement, but Courage realizes that his true intention is to revive his dead partner.
- Night of the Weremole: Muriel is bitten by a "Weremole". As she slowly turns into one, Courage must find a cure while Eustace believes that she is a gigantic mouse and tries to smash her with his mallet.
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Mother's Day: Eustace and Courage visit Eustace's mother for Mother's Day. Though Eustace tries to win his mother's love, she would rather dote on Courage , much to the dismay of both master and pet.
- Bad Hair Day: Dr. Vindaloo is bribed into telling Growth Industries that Muriel has a rare blood type ABXYZ. Courage must rescue Muriel from the Growth Industry and Eustice's mother, Ma.
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Forbidden Hat of Gold: Eustace finds Horst's map, leading to a hat made of gold, and takes Muriel and Courage along, leading them all into danger.
- King Ramses' Curse: When Courage finds a rare slab stolen from a mummy's tomb, Eustace's greed of keeping it causes the mummy's ghost to bring forth his ancient curses.
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The Clutching Foot: Eustace's foot fungus grows to an enormous size, getting a gangster mind of its own, and it forces Courage to steal money or Muriel will be crushed.
- Human Habitrail: Dr. Gerbil captures Eustace and Muriel and uses them for an experiment for his strange products while Courage sets out to rescue them.
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Mission To The Sun: The sun is about to go out, so Courage, Muriel, and Eustace go to outer space to fix it. But a small space creature goes inside Muriel's brain and starts making her go insane so that their mission ends up disastrous.
- Rumpledkiltskin: Muriel's "Uncle Angus" invites her to Scotland, where he imprisons her and demands that she makes thousands of kilts. It's up to Courage to learn Uncle's real name and free Muriel.
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Housecalls: Lonely Dr. Gerhart wants some neighbors, but his jealous old house fends them away. So he "brings" the Bagges' farm next to his house. But Gerhart's house intends on destroying the Bagges' home, and Courage has to find a way to make the house happy again.
- Campsite of Terror: Muriel, Eustace, and Courage go to a campsite for the weekend, and Muriel is kidnapped by two raccoons. Courage must save her as well as the raccoons who are trying to be captured by Eustace, who wants to get a $50,000 reward.
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The Record Deal: While cleaning out her junk, Shirley finds a mystic Velvet Vic record and when she throws it out, Eustace finds it. But when he listens to it, the actual Velvet Vic comes out of the player and traps Muriel instead of him in the Velvet Vic record, so Courage must get help from Shirley who can tell him how to get Muriel out of the record.
- So In Louvre Are We Two: When visiting the Louvre, Muriel is convinced that the Mona Lisa looks just like her, and they are like sisters. After the guard is convinced that it looks nothing like Muriel, he locks the museum expecting everyone to be out. Little does he know that the Bagges are trapped inside, and the paintings come to life.
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Night of the Scarecrow: After leaving a county fair, the Bagges get lost through a cornfield and crash into a scarecrow. They take him home where Muriel fixes him up and makes him a mouth so he can talk. But he becomes depressed when he isn't scary enough to frighten away Muriel's attackers, so he decides to train himself to be a much stronger and scarier scarecrow.
- The Snowman Cometh: A snowman refuses to melt, so he invents a machine capable of extracting the anti-melting gene from a human being and his targets are the Bagges.
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The Precious, Wonderful, Adorable, Loveable Duckling: A young duckling sees Eustace as his mom and wants to get rid of Muriel permanently.
- The Revenge of the Chicken from Outer Space: Courage's first enemy from the pilot returns fried and headless, and he intends on stealing Courage's head.
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Journey to the Center of Nowhere: Angered both by a drought and Muriel's use of eggplants in cooking, a humanized troupe of eggplants plot her downfall deep underground.
- Heads of Beef: Muriel is sick, so Eustace and Courage go to a burger diner owned by a pig and his wife, but Courage suspects that they are cannibalistic chefs.
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Klub Katz: Courage, Muriel, and Eustace wash up on a deserted island. But it soon doesn't seem to be deserted when a familiar face shows up, Katz.
- Evil Weevil: Eustace hits a strange weevil with his truck, and Muriel invites it to stay over for dinner. But it soon begins sucking the Bagges' lives away.
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McPhearson Phantom: Eustace and Muriel's marriage is tested when they are manipulated into turning against each other by a crafty phantom and an unlikely accomplice, Ma.
- The Uncommon Cold: Muriel seeks a cure for her unusual cold among some swamp-slugs enslaved by a snake named Big Bayou. The cure lies in Big Bayou's book, which Courage must steal in order to heal Muriel and free the slugs.
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Farmer-Hunter, Farmer-Hunted: Eustace tries to prove that he can hunt to his dead brother, Horst. But the deer families are tired of being hunted and the father deer decides to hunt Eustace instead. Courage hosts a game show to see who gets to shoot who.
- Squatting Tiger, Hidden Dog: A Chinese empress who wants to grind up Muriel's bones. Courage can save Muriel, but must pass through a series of deadly tests first.
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Muted Muriel: Muriel has had enough of Eustace not listening to her, and so she decides not to talk to him again. Courage visits Shirley, and asks her if she can make her talk.
- Serpent of the Evil River: The Bagges are suckered into a free cruise, only to be tricked into assisting the captain in capturing an opera-loving sea serpent named Carmen.
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The Transplant: The Bagges find the bones of a kangaroo monster and when Eustace attempts on auctioning them to discoverers, he ends up twisting his spine. Dr. Vindaloo does disc-transplant on Eustace, causing him to turn into a kangaroo monster himself.
- The Shadow of Courage: A wealthy miser dies alone in his observatory, releasing his playful shadow, who plays tricks and pranks aplenty on the denizens of Nowhere.
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Dr. Le Quack, Amnesia Specialist: Muriel suffers from amnesia and Courage calls in the help of Dr. Le Quack, a con artist duck who is impersonating as a doctor.
- The Quilt Club: Muriel and Courage go to a quilt shop and meet conjoined twin sisters, and Muriel wants to be a part of their quilt club, so she goes to an extreme quilt making to join them. But Courage starts smelling something fishy.
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Swindlin' Wind: Eustace, Muriel, and Courage go to Shirley's Shop, where Muriel sees a necklace she wants. Eustace gives Shirley an oil will for the necklace, but she realizes that it's an oil bill. Shirley gets upset for being ripped off, and casts a spell on Eustace and Muriel that causes them to swindle each other, and it's up to Courage to break the spell.
- Dome of Doom: After a drought, the Bagges are unable to grow food. But when they read an ad of free food, they order it. However the plant fruits and vegetables come to life and attempt to eat the Bagges.
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Snowman's Revenge: After the north pole faces heat and everything melts, the snowman creates a mechanical mitten that allows the user to produce snow at will. He moves in the Bagges's farm and freezes it, causing extreme coldness upon them.
- Remembrance of Courage Past: After Courage sees a list of missing dogs, a flashback appears showing how Courage's parents got sent into outer space by an evil vet. Muriel and Eustace take Courage to the same vet to get him checked out. But the vet plans to send Muriel and Eustace to outer space. Luckily, Courage comes up with a plan. He runs to the control board and opens the door so Eustace and Muriel can get out of the rocket, and traps the vet in and launches the rocket. When the vet lands on the same planet as Courage's parents and a group of other dogs, all of the dogs attack him
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Perfect: When Courage can't do anything right, an old teacher approaches him, and decides to train him strictly into becoming a perfect dog.
Note: The Series ends with Courage being perfect the way he is.
- Muriel Blows Up: A missile strikes the farm, mutating a carrot in the garden. When Muriel eats it, she begins to grow. Courage must figure out a way to get to the general and disarm the device before time runs out. The episode ends with Muriel still being fat after she and Courage save themselves from blowing up with only Eustace eating the carrot of receiving ten million bucks to the General and Luetianent by being exploded.
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Profiles in Courage: Courage, Muriel and Eustace go to a county fair and have their silhouettes drawn. When the silhouettes come to life later that night and replace Muriel and Eustace, Courage must convince the creatures it's more fun to be paper than people.
- Bride of Swamp Monster: Muriel buys a necklace, and puts her picture inside, but she loses the pendant in a local swamp. The Swamp Monster finds it and believes Muriel is his long-lost bride. Courage must locate the real bride of the Swamp Monster, and reconcile the long-lost lovers in order to get Muriel back.
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Goat Pain: Muriel throws out her back, and the only cure is a hot spring on top of Mt. Nowhere. But the peak is guarded by a super-strong goat angry at human beings for clogging the spring with trash. Courage has to get past the goat and somehow restore the spring.
- A strange, dog-hating woman named Kitty, wearing a mask, appears at the Bagges' house. She recklessly starts beating Courage and she tells the Bagges that her best friend Bunny fell in love with a gangster named Mad Dog, who treats Bunny as a slave, and when she tried to flee with Bunny, she was blackmailed. As Courage is being harmed by Kitty, he tries to free Bunny.
- Scuba Scuba Doo: While on a tropical island, Courage and Muriel discover a underwater city made of coral. There, they befriend the citizens. Meanwhile, Eustace informs Ma that the coral there can make fine wigs, and his mother destroys the city and evades them of their coral for her wig factory.
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Conway the Contaminationist: A strange elderly man moves in with the Bagges, and he changes their lives when he assists them to live in a life of filth, causing biohazard on the farm.
- Courage Meets the Mummy: The mummy of a Mayan baker seeks revenge for the injustice that was done to him.
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Invisible Muriel: Muriel becomes invisible when wears a magical gem. She is then captured by the government. Courage and Eustace, with the help of Dr. Vindaloo, set out to rescue her.
- Stormy Weather: A storm goddess who mistakes Courage to be her dog, Duncan, decides to take him, making Muriel furious, and the goddess' rage causes violent storms to occur. Courage must find Duncan before it's too late.
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The Sandman Sleeps: The sandman is having trouble sleeping at night, so he takes Muriel's sleeping sand, causing Muriel to have insomnia. Courage must find the sandman and get her sleeping sand back.
- Fishy Business: A fish missionary arrives at the farmhouse, believing that the Bagges are unfit to live on the land, and the fish court forces them to live in a fish bowl with gills.
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Angry Nasty People: Benton Tarantella, the zombie director returns to convince the Bagges to star in his latest film Angry Nasty People.
- The Hunchback of Nowhere: A small, ugly, yet kind hunchback seeks a place to spend the night. Courage and Muriel welcomes him, but Eustace doesn't.
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The Gods Must Be Goosey: A goose god falls in love with Muriel and tries every possible way to take her to the heavens as his queen.
- Car Broke, Phone Yes: An alien steals Muriel's kindness and Courage has to get it back or she will stay grumpy forever.
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Cowboy Courage: Courage and Muriel fantasize that they were in the old west, with Courage playing the sheriff, Muriel as the bartender, and Eustace as the outlaw.
- The Demon in the Mattress: Muriel is tired of the old mattress and orders a new one, but Courage and Eustace finds out that the bed is possessed by a demon and it possesses Muriel.
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Freaky Fred: Muriel's nephew, Fred, visits the Bagge's home. He's a mentally unstable barber who has the intention of shaving of Courage's fur.
- Mondo Magic: Muriel feels she is being watched by someone, and Courage discovers a magic kit on the porch, and after doing tricks with it, a magician named Mondo comes out and shows off his magic. He is soon discovered to be a hideous creature who traps Eustace in the TV and making Muriel is bride by turning her into the same creature.
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Watch the Birdies: When Muriel gets abducted by a giant mother bird, it tells her to look after its three babies or she will be eaten. Courage must aid Muriel in keeping the babies safe.
- Feast of the Bullfrogs: Bullfrogs who have had all the water in their pond dried up start to invade the Bagges' house for water. There they enslave Courage, Muriel, and Eustace and force them to act like frogs.
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Tulip's Worm: Two alien teddy bears blast the citizens out of sight when they are looking for a giant worm. Courage discovers the worm outside of the farmhouse, and it reacts whenever he plays a tuba. The space bears come to the scene, and reveal that the little worm is actually a space worm owned by an alien girl named Tulip. As Muriel and the two teddy bears are eaten by the beast, Courage must take the worm to outer space before Muriel and the bears are digested.
- The Duck Brothers: Two alien ducks come to Earth and puts a mind controlling device on Muriel so they can use her as a tool of getting their brother back.
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Shirley the Medium: Courage digs up a mysterious case, left behind by Eustace's dead brother Horst. The case is locked, so Shirley the Medium is called to contact him from the dead in order to obtain the key.
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Note: Ringo Starr provides the voices of The Duck Brothers. Mary Testa provides the voice of Shirley the Medium.
- Cabaret Courage: Courage, Muriel and Eustace come to "Hollowood", but after falling inside a manhole, they encounter a giant blob creature who demands entertainment and if he likes their performances, he would give out a glamorous prizes.
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Wrath of the Librarian: Courage finds a two year overdue book. When he decides to return it, he does not have enough money for the $10,000 fee, so the librarian casts a spell on Muriel and Eustace, turning them into the characters from the book.
- The Curse of Shirley: Shirley lays a curse upon Eustace when he is too inappropriate to others.
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Courage in the Big Stinkin' City: The Bagges go to New York to perform, where a giant roach named Schwick offers to let them stay at his place until the show. Schwick forces Courage to fetch an "evil package" for him, or he'll release his deadly pet.
- Hard Drive Courage: The computer develops a virus and it traps Muriel inside the computer. Courage must go into the computer world to bring her back.
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The Ride of the Valkyries: While the Bagges are on holiday, three Valkyries mistake Muriel as their sister and carry her off into the sky where they will fight against the trolls on the next day. Courage sets out to win Muriel back.
- The Last of the Starmakers: When a space-faring squid whose eggs turn into stars lands on the Bagge farm. Eustace wants to sell the eggs to the military for research. Courage has to save the eggs and the mother squid to keep the heavens twinkling.
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Son of the Chicken from Outer Space: The three-headed son of the Chicken From Outer Space shows up, trying to fulfill a vow to destroy Courage. But Courage is more resourceful than the chicken anticipated.
- Little Muriel: Muriel is sucked into a tornado and returns as the age of 3½ years old, and Courage has to find a way to get her back to normal.
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The Great Fusilli: The Great Fusilli brings his magical stage to the house of Courage and wants Muriel and Eustace in his acting crew, but Courage realizes that he intends on turning them into puppets.
- Courageous Cure: A race of multi-limbed aliens arrive on Earth, seeking a cure for a virus which causes them to keep punching themselves. They experiment on Muriel and Eustace by letting them grow more hands.
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Ball of Revenge: Sick of Muriel's doting on Courage, Eustace invites Katz, Le Quack, the Weremole, the Cajun Fox, the Giant Foot and the Puddle Queen to the house to destroy Courage in a game of dodgeball.
- Courage the Fly: Courage is turned into a fly by Di Lung, and must figure out how to save the Bagges' farm house before a gigantic satellite falls on it.
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Katz Kandy: Katz is determined on winning the Sweet-Stuff contest, and kidnaps Muriel in order to get her secret recipe. Meanwhile, Courage must defeat Katz in various competitions.
- Le Quack Balloon: Le Quack reappears and kidnaps Muriel and puts her on a hot air balloon. He teaches her to bungee-jump from the balloon so she can grab a Swedish ingredient for her food. But he is tricking her so he can rob the Swedish national piggy bank instead.
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Windmill Vandals: Legend has it that if the Bagge windmill stops turning, the ghosts of dead vandals will return to attack everyone at the homestead. Courage and Muriel must keep the windmill moving while Eustace tries to fix it.
- Courage Meets Bigfoot: Bigfoot is spotted near the Bagge's home, and a reward is given to anyone who captures it. Courage befriends Bigfoot and attempts to protect it from Eustace before he catches it.
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Hothead: Eustace wants to grow hair, so he decides to go to an institute of experimental hair growth and receives a hair growth potion, but Courage discovers that it has a horrible side effect.
- Aqua Farmer: Unimpressed by Jojo the Dolphin's performance at a local aquarium, Eustace challenges the sea mammal to a race, losing pathetically. He demands a rematch, staking his wife as the prize of the race.
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Food of the Dragon: A seafood dinner attracts a dragon who hasn't learned to fly. He's determined to eat Eustace and Muriel unless Courage can teach him to fly.
- Nowhere TV: Le Quack hypnotizes Muriel and Eustace through television so they can be transformed into slaves and steal a large amount of lottery money to bring to him.
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Mega Muriel the Magnificent: A thunderstorm causes Courage's computer to come to life. He downloads himself into Muriel to prove how daring and death-defying it can be, and show the Nowhere citizens between Courage and his own fear.
- Katz Under the Sea: When Muriel and Courage go on a submarine on their vacation, they do not realize it is being ran by one of their old enemies, Katz.
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Curtain of Cruelty: When a strange red curtain is going through Nowhere making the citizens cruel and mean, Courage finds out that all of this is caused by Old Man, who is cruel and unhappy, and wants everyone else to be cruel and unhappy.
- Dr. Zalost has been unhappy since he can remember, and demands the mayor to give him a tremendous amount of money, but when he doesn't give it to him, he starts shooting cannonballs that make people unhappy. Muriel is hit by one, and she goes in a depressing state. But even when the mayor gives him the money, Zalost is still shooting the unhappy balls. Courage must go inside Zalost's tower and stop him once and for all.
- King of Flan: The King of Flan uses television to hypnotize everyone in Nowhere to eat as much flan as possible. As the citizens of Nowhere become addicted to flan, Courage must stop the King before he destroys the city.
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Courage Under the Volcano: Eustace, Muriel, and Courage crash down on an island, and is welcomed by a native chief. The citizens dress Muriel in their special native clothing so she can be sacrificed to the Volcano God, who is causing the island to shake. Courage must go inside the volcano and talk to the god before the natives drop Muriel in the volcano.
- Family Business: A burglar claiming to be a relative breaks into Bagges' house, but he suffers from multiple personality disorder and his attitude towards them changes. Courage, Muriel, and Eustace are stuck with his schemes.
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1,000 Years of Courage: Due to a meteor impacting the planet, Courage, Eustace, and Muriel are hurtled a thousand years into a future inhabited by banana people.
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